Identifying Data 2019/20
Subject (*) Applied Microbiology and Microbiological Control Code 610G02016
Study programme
Grao en Bioloxía
Descriptors Cycle Period Year Type Credits
Graduate 2nd four-month period
Second Obligatory 6
Language
Spanish
Teaching method Face-to-face
Prerequisites
Department Bioloxía
Coordinador
Torres Vaamonde, Jose Enrique
E-mail
enrique.torres@udc.es
Lecturers
Fidalgo Paredes, Pablo
Herrero Lopez, Maria Concepcion
Poza Domínguez, Margarita
Torres Vaamonde, Jose Enrique
E-mail
pablo.fidalgo@udc.es
concepcion.herrero@udc.es
margarita.poza.dominguez@correo.udc.es
enrique.torres@udc.es
Web
General description Asignatura na que se tratan os conceptos, procedementos e métodos do control microbiolóxico, a interacción normal e patóxena dos microorganismos con animais, os coñecementos básicos da microbioloxía ambiental e a aplicación dos microorganismos nos procesos industriais a grande escala.

Study programme competencies
Code Study programme competences
A1 Recoñecer distintos niveis de organización nos sistemas vivos.
A2 Identificar organismos.
A4 Obter, manexar, conservar e observar especímenes.
A9 Identificar e utilizar bioindicadores.
A11 Identificar e analizar material de orixe biolóxica e as súas anomalías.
A13 Realizar o illamento e cultivo de microorganismos e virus.
A14 Desenvolver e aplicar produtos e procesos de microorganismos.
A15 Deseñar e aplicar procesos biotecnológicos.
A21 Deseñar modelos de procesos biolóxicos.
A25 Desenvolver e aplicar técnicas de biocontrol.
A27 Dirixir, redactar e executar proxectos en Bioloxía.
A30 Manexar adecuadamente instrumentación científica.
A31 Desenvolverse con seguridade nun laboratorio.
B2 Resolver problemas de forma efectiva.
B3 Aplicar un pensamento crítico, lóxico e creativo.
B4 Traballar de forma autónoma con iniciativa.
B5 Traballar en colaboración.
B6 Organizar e planificar o traballo.
B7 Comunicarse de maneira efectiva nunha contorna de traballo.
B8 Sintetizar a información.
B9 Formarse unha opinión propia.
B10 Exercer a crítica científica.
B11 Debater en público.
B12 Adaptarse a novas situacións.
C3 Utilizar as ferramentas básicas das tecnoloxías da información e as comunicacións (TIC) necesarias para o exercicio da súa profesión e para a aprendizaxe ao longo da súa vida.
C6 Valorar criticamente o coñecemento, a tecnoloxía e a información dispoñible para resolver os problemas cos que deben enfrontarse.
C8 Valorar a importancia que ten a investigación, a innovación e o desenvolvemento tecnolóxico no avance socioeconómico e cultural da sociedade.

Learning aims
Learning outcomes Study programme competences
Function and application of microorganisms in clinical, environmental and industrial sectors. A1
A4
A11
A14
A15
A21
A30
A31
B2
B3
B4
B5
B6
B7
B8
B9
B10
B11
B12
C3
C6
C8
Know and use methods and techniques used in microbiological control. A1
A2
A4
A9
A13
A14
A15
A25
A27
A30
A31
B2
B3
B4
B5
B6
B7
B8
B9
B10
B11
B12
C3
C6
C8

Contents
Topic Sub-topic
UNIT 1. - CONCEPTS AND MICROBIAL CONTROL PROCEDURES ITEM 1. CONTROL BY PHYSICAL AGENTS

ITEM 2. CONTROL BY CHEMICAL AGENTS

ITEM 3. ANTIMICROBIAL CHEMOTHERAPEUTICS
UNIT 2. - METHODS FOR THE MICROBIOLOGICAL CONTROL OF QUALITY ITEM 4. IMPORTANCE OF THE MICROBIOLOGICAL QUALITY CONTROL: MICROBIOLOGICAL CRITERIA

ITEM 5. SAMPLING: MICROBIOLOGICAL SAMPLING PROGRAMMES

ITEM 6. PROCEDURES OF MICROBIOLOGICAL ANALYSIS OF COMMERCIAL PRODUCTS

ITEM 7. MICROBIOLOGICAL INDICATORS OF QUALITY AND SAFETY
UNIT 3. - MICROORGANISMS AND DISEASE ITEM 8. NORMAL MICROBIOTA. MICROBIAL PATHOGENICITY

ITEM 9. MICROBIAL INTERACTION WITH THE HOST DEFENSES

ITEM 10. IMMUNOPATHOLOGY AND IMMUNOLOGICAL THERAPEUTICS

ITEM 11. IMMUNOLOGICAL TECHNIQUES FOR THE DETECTION AND IDENTIFICATION OF MICROORGANISMS
UNIT 4. - ENVIRONMENTAL MICROBIOLOGY ITEM 12. MICROORGANISMS AS COMPONENTS OF ECOSYSTEMS. BIOGEOCHEMICAL CYCLES

ITEM 13. MICROBIAL INTERACTIONS

ITEM 14. MICROORGANISMS IN NATURAL ENVIRONMENTS
UNIT 5. - USE AND INDUSTRIAL MICROORGANISMS APPLICATIONS ITEM 15. INDUSTRIAL MICROORGANISMS AND FORMATION OF PRODUCTS

ITEM 16. GENETIC ENGINEERING: PRINCIPLES AND APPLICATIONS

ITEM 17. INDUSTRIAL PROCESSES: TYPES OF BIOREACTORS

ITEM 18. GROWTH OF MICROORGANISMS IN INDUSTRIAL SYSTEMS
UNIT 6. - INDUSTRIAL PRODUCTS USING MICROORGANISMS ITEM 19. ALCOHOLIC FERMENTATION

ITEM 20. LACTIC FERMENTATION

ITEM 21. PRODUCTION OF ORGANIC ACIDS, ANTIBIOTICS, VITAMINS AND ENZYMES
LABORATORY PRACTICES Practice 1. Alcoholic fermentation

Practice 2. Lactic acid fermentation

Practice 3. Obtaining of microbial metabolites of interest.

Practice 4. Determination of antibiotic susceptibility of bacteria

Practice 5. Control of microorganisms by physical agents

Practice 6. Experimental determination of decimal reduction time: the value of D

Planning
Methodologies / tests Competencies Ordinary class hours Student’s personal work hours Total hours
Guest lecture / keynote speech A15 A21 A25 B3 B6 B7 B8 B9 B10 B11 B12 C3 C6 C8 30 67.5 97.5
Laboratory practice A1 A2 A4 A9 A11 A13 A14 A25 A30 A31 15 15 30
Problem solving B2 B4 B5 6 9 15
Mixed objective/subjective test A14 A15 A21 A27 B2 2.5 0 2.5
 
Personalized attention 5 0 5
 
(*)The information in the planning table is for guidance only and does not take into account the heterogeneity of the students.

Methodologies
Methodologies Description
Guest lecture / keynote speech The exposition of the theoretical content of the subject will be carried out by teachers. In the exposition, different resources based on information technologies and on the use of web-based resources will be used.
Laboratory practice Practices are of compulsory attendance. In the practice sessions, practical examples of most of the processes that have been shown in the lectures and keynote sessions will be carried out.
Problem solving The resolution of problems related to different aspects of the content of the subject will take place in seminars. The knowledge acquired in solving the problems will be assessed in the mixed test.
Mixed objective/subjective test The contents explained in lectures and keynote sessions and in the resolution of problems seminars will be assessed through a written test.

Personalized attention
Methodologies
Problem solving
Laboratory practice
Guest lecture / keynote speech
Mixed objective/subjective test
Description
Tutorials are included within the personalized attention for both theoretical sessions (lectures and keynotes sessions) as for seminars and laboratory practices. Also, theory and practical test preparation sessions can be included. Specific times of personalized attention for the review of the tests of theory, practices and other aspects that are evaluated in the mixed event will be reserved.

Assessment
Methodologies Competencies Description Qualification
Problem solving B2 B4 B5 There will be a continuous evaluation of the problem solving and questionnaires, which will be assessed and will account 10% of the final mark. In addition, the knowledge acquired in solving problems will be assessed in the mixed test. 10
Laboratory practice A1 A2 A4 A9 A11 A13 A14 A25 A30 A31 Mandatory attendance. Continuous evaluation throughout the development of the lab work (5%). Exam (15%). 20
Mixed objective/subjective test A14 A15 A21 A27 B2 Written test of knowledge acquired in the master classes and seminars. 70
 
Assessment comments
Attendance to laboratory practices and problem solving sessions is compulsory to pass the subject.

If the student does not attend the lab practices, he/she will not pass the subject; therefore they cannot do the mixed test.

To pass the subject, each of the evaluated parts must be passed; theory, practices and problem solving.

To pass the practices, besides the attendance, the student must pass a specific test.

For continuous evaluation, regarding to the resolution of problems, each student must submit the corresponding problems solved prior to attend session and as indicated by the teacher. Finally, it should go to the corresponding session.

Mixed test: It will consist of two parts, theoretical (50%) and problem solving (20%).

"NO PRESENTADO" mark is obtained when the student do not do the written exam (mixed test).

If the student does not pass the subject at the first opportunity, he/she must overcome the unpassed part at the second chance. If it is the theory, repeating the corresponding part of the mixed test; the same in the case of problems solving. If they are the practices, repeating the test.

The highest grade "Matricula de Honor" will be mainly given to students that pass the subject in the"First Opportunity". And it will only be given in the so-called "second Opportunity" if there are still any available.

As a part of the continuous evaluation, the progression of the student throughout the semester will be taken into consideration with a maximum of 1 point.

In the case of very special and exceptional circumstances, adequately justified, the teacher can totally or partially exempts the student from part of the evaluation process. This student will then have to go through an examination process where he/she will need to clearly proof his/her level of knowledge, competence, capabilities and skills.


Sources of information
Basic
DURIEUX, A y SIMON, JP (eds.) 2001. Applied Microbiology. Kluwer Academic Publishers FORSYTHE, SJ y HAYES, PR, 2002. Higiene de los alimentos, microbiología y HACCP. Editorial Acribia. Zaragoza. España. ICMSF (2000). Microorganismos de los alimentos 1. Su significado y métodos de enumeración. Editorial Acribia, s.a. Zaragoza. España. ICMSF (2000). Microorganismos de los alimentos 2. Métodos de muestreo para análisis microbiológicos: principios y aplicaciones específicas. Editorial Acribia, s.a. Zaragoza. España. MADIGAN, MT, MARTINKO JM, DUNLAP, PV y CLARCK, DP, 2009. Brock, Biología de Los Microorganismos 12ª Edición. Pearson Education. Madrid. MOSIER, NS y LADISCH, MR, 2009. Modern biotechnology. John Wiley & Sons, Inc. RATLEDGE, C y KRISTIANSEN B. (Eds) 2001 Basic Biotechnology – Second Edition Publisher: Cambridge University Press. SMITH, JE. 2006. Biotecnología. Editorial Acribia. Zaragoza. THIEMAN, WJ y PALLADINO, MA, 2010. Introducción a la biotecnología. Prentice Hall. WILLEY, JM, SHERWOOD, LM y WOOLVERTON, CJ 2009 Microbiología de Prescott, Harley y Klein. 7ª Edición. McGraw-Hill-Interamericana de España. Madrid.
Complementary
Web resources: Some URLs that collect resources and repositories of techniques, images, databases, etc. related to the applied microbiology, biotechnology and microbiological control are included in this section: http://www.microbialcellfactories.com/start.asp http://www.microbialcellfactories.com/start.asp http://www.eng.rpi.edu/chme/ http://www.eng.rpi.edu/chme/ http://wiki.yeastgenome.org/ http://wiki.yeastgenome.org/ http://www.phys.ksu.edu/gene/ http://www.phys.ksu.edu/gene/ http://www.asm.org/ http://www.asm.org/ http://www.bio.davidson.edu/courses/genomics/genomics.html http://www.bio.davidson.edu/courses/genomics/genomics.html http://www.nsta.org/ http://www.nsta.org/ http://fangman-brewer.genetics.washington.edu/index.html http://fangman-brewer.genetics.washington.edu/index.html http://vadlo.com/ http://vadlo.com/ http://www.lgcstandards-atcc.org/ http://www.lgcstandards-atcc.org/ Other support materials: The students will have support material in the MOODLE platform of the UDC. Materials, activities and control tests, etc. will incorporate throughout the course, both made by Professor and students, who will be changing throughout the course.

Recommendations
Subjects that it is recommended to have taken before
Microbiology/610G02015

Subjects that are recommended to be taken simultaneously

Subjects that continue the syllabus
Microbiology Techniques/610G02017
Microbiology and Environmental Biotechnology/610G02018

Other comments
Power point presentations uploaded in Moodle constitute a guide for the study of the themes, but in no case they include the overall contents of these themes


(*)The teaching guide is the document in which the URV publishes the information about all its courses. It is a public document and cannot be modified. Only in exceptional cases can it be revised by the competent agent or duly revised so that it is in line with current legislation.