Teaching GuideTerm
Faculty of Science
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Grao en Nanociencia e Nanotecnoloxía
 Subjects
  Molecular and Metabolic Biochemistry
   Contents
Topic Sub-topic
TOPIC 1. DNA replication Semiconservative DNA replication. Enzymology of the replication. Telomere synthesis. Replication of mitochondrial and chloroplast DNA.
TOPIC 2. Synthesis and processing of RNA. Classes of RNA. RNA polymerases. Promoters and transcriptional apparatus. Transcription in prokaryotes and eukaryotes: initiation, elongation and termination. Interrupted genes: exons and introns. Processing of eukaryotic pre-mRNA. Synthesis and processing of pre-rRNA. Synthesis, processing and editiong of the different RNAs.
TOPIC 3. Mutation and DNA repair. Mutation molecular basis. DNA Repair mechanisms.
TOPIC 4. Molecular mechanism of genetic recombination, The role of genetic recombination. Gene conversion. Models of homologous and site-specific recombination.
TOPIC 5. OMICs. Methodology for genome and genome expression studies.
TOPIC 6. Translation and protein processing. Central dogma in molecular biology. Ribosomes and tRNAs. Translation cycle: initiation, elongation, and termination. Genetic code and genetic decoding.
TOPIC 7. Regulation of gene expresssion. Regulation od gene expression in bacteria. Operons. Regulation of gene expression in eukaryotes.Changes in chromatin structure. Transcription, RNA processing and mRNA stability control. Control at the level of translation.
TEMA 8. Proteomics. Methodology for protein and proteins expression studies.
TOPIC 9. Bioenergetics and introduction to metabolism. Anabolic and catabolic pathways. Compartmentalization. Need for coordination and interaction between the different routes. Transport of metabolites across cell membranes. Oxidation reduction in energy production. Generation of ATP: substrate-level phosphorylation, oxidative phosphorylation and photosynthetic phosphorylation as energy production systems.
TOPIC 10. Glycolysis and catabolism of hexoses. Location of the routes. Stages and pathway regulation. Fermentations. Relationship with the pentose phosphate pathway.
TOPIC 11. TCA cycle. Location of the route. Conversion of pyruvate to acetyl-CoA. Study of the pyruvate dehydrogenase complex and interaction with other routes. Anaplerotic routes, importance of mitochondrial shuttles and balances.
TOPIC 12. Gluconeogenesis. Definition and localization, metabolic need for this route. Glyoxylate cycle.
TOPIC 13. "Dark Phase" of photosynthesis. Relationship with gluconeogenesis. he Calvin cycle. Photorespiration. Regulation. Sucrose metabolism and starch.
TOPIC 14. Glycogen metabolism. The reserve polysaccharide glycogen. Biosynthesis and degradation of muscle and liver glycogen. Regulation. The role of the liver in the maintenance of blood glucose. Congenital anomalies of glycogen metabolism.
TOPIC 15. Lipid Metabolism. Lipid catabolism: lipolysis, beta-oxidation. Biosynthesis of fatty acids, triglycerides, membrane lipids and steroids. Regulation of lipid metabolism. Metabolism of ketone bodies.
TOPIC 16. Metabolism of amino acids. Digestion and degradation of intracellular proteins. Nitrogen removal of amino acids. Urea cycle. Ammonia transport to the liver. Fate of the carbon skeleton of amino acids. Amino acid biosynthesis. Regulation
TOPIC 17. Derivatives of amino acids. Amino acid precursor functions: Amines with biological activity, glutathione, porphyrins. Metabolism of purine and pyrimidine nucleotides. Regulation
TOPIC 18. Integration of metabolism. Metabolic profiling of major organs. Key connections between routes: glucose-6-phosphate, pyruvate and acetyl CoA. Metabolic adaptations to stress. Fasting, exercise.
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